Journal article
DIABLO: an integrative approach for identifying key molecular drivers from multi-omics assays.
Amrit Singh, Casey P Shannon, Benoît Gautier, Florian Rohart, Michaël Vacher, Scott J Tebbutt, Kim-Anh Lê Cao
Bioinformatics | Oxford University Press (OUP) | Published : 2019
Abstract
MOTIVATION: In the continuously expanding omics era, novel computational and statistical strategies are needed for data integration and identification of biomarkers and molecular signatures. We present Data Integration Analysis for Biomarker discovery using Latent cOmponents (DIABLO), a multi-omics integrative method that seeks for common information across different data types through the selection of a subset of molecular features, while discriminating between multiple phenotypic groups. RESULTS: Using simulations and benchmark multi-omics studies, we show that DIABLO identifies features with superior biological relevance compared with existing unsupervised integrative methods, while achie..
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Awarded by NIAID NIH HHS
Funding Acknowledgements
This work was supported by the National Institute of Allergy and Infectious Diseases [U19AI118608 to C.P.S./S.J.T.] and the National Health and Medical Research Council [NHMRC] Career Development fellowship GNT1087415 [K.-A.L.C.].